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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920245.1_cds_XP_016469412.1_61957
CDS Infomation

[gene=LOC107791789] [db_xref=GeneID:107791789] [protein=uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic-like] [protein_id=XP_016469412.1] [location=complement(join(12897..12961,13063..13132,13207..13354,13438..13550,14764..14835,15379..15506,17294..17489,17751..17930,18013..18153,18276..18440,18901..19047,19138..19227,20096..20302,21181..21447))] [gbkey=CDS]
Sequence

ATGGAGGGAATTTGCACTAGTTGCTTGTACTCTTCAATAACCCCATCAATTGAGTACAAA
AGCAGAAGAAAACTCTTGAATTCCATTCAAAAAAACCGAACTTCATTGCCAAGAATTTGT
GCAGTGAGTAGTGTTTCTCCTACACAAAGCCCATCAGAGAAAACTGGTGCTTTACAAGTG
AAGGACATATCTAGGATTAGCGCTTTGGAGCAACTTGATTTTGAACGTGGTGTTTGCGTT
CCCTTTCGCAAATATTCCCCTGAATCTGTGAGAAACAAGGTGTTAGAGTCAAGGGGACAG
ATTTTGTCTTTGGTTGGTAGAGGAGTAGAGATTGTTTGGAATTTGGGGCTCTATTGGACT
ACATTGGTGTATGATTATTTGGTGGGCCGTGACGAAGAAGTTGTTCCTTTCCGTGCTCGG
CAGCTGAGGACTCTGTTGTGTGATTTGGGACCTTCTTTCATCAAAGCAGGACAGGTGCTT
GCAAATAGGCCTGATATCATAAGAGAAGATTACATGAATGAACTTTGCATTCTTCAAGAT
GACGTTCCGGCATTTCCTAATCAGGTTGCTTTTAACATCATAGAAGAGGAATTGGGCCAG
CCTCTTGAAGCTGTTTTCAGCAAAATTTCTTCAGAAACTATTGCAGCTGCAAGTTTGGGT
CAAGTGTACCGTGCTACTTTACGTGCTTCAGGGGAAGATGTTGCCATAAAGGTTCAAAGG
CCTCAGATAGAGCCTATCATCTACAGAGATCTTTTTCTCTTCCGCACTCTGGCTTCATTC
TTGAATGGCATCAGTCTACAGAAACTGGGGTGCAACGCCGAGCTTATAGTTGATGAATTT
GGTGAGAAGCTATTGGAGGAGTTGGATTATACCTTGGAAGCTCGTAATATCGAAGACTTC
TTGGAGAATTTCAAAGATGACCCTACTGTTAAAATACCTCGGGTTTACATACAGCTTTCT
GGTCCACGTGTTTTGGTAATGGAGTGGATCGATGGAATCCGGTGCACCGATCCACAGGCA
ATCAGAGAGGCAGGAATTGATATAGATGGATTTTTGACCGTTGGAGTTAGTGCAGCCTTA
CGGCAGCTACTCGAATTTGGCCTATTCCACGGCGACCCTCACCCTGGGAATGTCTTTGCT
ATGCGTGACGGACGCATTGCCTATGTGGATTTTGGCAATGTTGCTGTGCTCAGTCAGCAA
AATAAACAGATTCTGATTGATGCTGTTGTGCATGCGGTGAATGAGGACTATGGCGAGATG
GCAAATGATTTTACCAGGCTTGGATTCCTAGCTAGTGGAACTGATGTTGCCCCCATTGTT
CCAGCATTAGAAGCAATATGGCAAAACTCCCTTGAAAAAGGACTTGCTGACTTTAATTTT
AGAAGTGTTACAGGCAAATTCAATCAACTAGTTTACAACTATCCTATCCGGATACCAGAA
AGGTTTTCTCTCGTTATTCGTTCTTTATTGACTCAAGAAGGCATTTGTTTGACCCTGGAG
CCAGATTTCAAGTTTCTGGAGGTAGCCTATCCTTATGTGGCAAAGCGTCTCCTAACAGAT
CCTAACCCAGCTTTACGTGAACGCCTTATACAGGTTCTGTTCAAGGATGGTCTCTTCCAG
TGGAAACGACTGGAGAACCTGATAACTCTAGCAAAGGAAAACGTCACAAAACTGAGCGAA
AACCCTGCATTTCGAGGGAATAATAGAGGAACCAGCAAACATTTGAAGATTGAACAGAAA
CTAGACCTCACTGACACAATCAAGGATGGAGCTCGACTTTTCATACTTGATGAAGGAATT
CGTAGGCAGCTTCTTCTTGCTTTGACCGAAGACTCCAAGCTTCACATTGAAGAAGTAGTT
GATGTATATAGACTGCTTGAAGACCAGGTAGATGTACCTTCAATGGCTTTAGGACTAGCA
CAAGACTTACCATCTGTTGCTCGAGATATATTGCTTTCATGGAGTGCCTCTGTACTATCA
GACCGATAG

Peptide Sequence

PEP ID

XP_016469412.1
PEP Infomation

PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic-like [Nicotiana tabacum]
Sequence

MEGICTSCLYSSITPSIEYKSRRKLLNSIQKNRTSLPRICAVSSVSPTQSPSEKTGALQV
KDISRISALEQLDFERGVCVPFRKYSPESVRNKVLESRGQILSLVGRGVEIVWNLGLYWT
TLVYDYLVGRDEEVVPFRARQLRTLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQD
DVPAFPNQVAFNIIEEELGQPLEAVFSKISSETIAAASLGQVYRATLRASGEDVAIKVQR
PQIEPIIYRDLFLFRTLASFLNGISLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDF
LENFKDDPTVKIPRVYIQLSGPRVLVMEWIDGIRCTDPQAIREAGIDIDGFLTVGVSAAL
RQLLEFGLFHGDPHPGNVFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEM
ANDFTRLGFLASGTDVAPIVPALEAIWQNSLEKGLADFNFRSVTGKFNQLVYNYPIRIPE
RFSLVIRSLLTQEGICLTLEPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQ
WKRLENLITLAKENVTKLSENPAFRGNNRGTSKHLKIEQKLDLTDTIKDGARLFILDEGI
RRQLLLALTEDSKLHIEEVVDVYRLLEDQVDVPSMALGLAQDLPSVARDILLSWSASVLS
DR

Transcript Sequence

Gene sequence data has not been registered.